PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005645.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

SBP

Protein Properties

Length: 325aa MW: 35008.5 Da PI: 8.8847

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005645.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	137.6	3.7e-43	67	143	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC+ dls+ak+y++rhkvC vhsk+p+v+v+gleqrfCqqCsrfh l efD++krsCrrrLa+hnerrrk++ Cse_sc005645.1_g020.1 67 RCQVEGCNLDLSDAKTYYSRHKVCGVHSKTPKVVVNGLEQRFCQQCSRFHLLPEFDQGKRSCRRRLAGHNERRRKPT 143 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MERGGSSGSS ESHFLKIGQK IYFEDANGGD DGKQEDGLSP VGGGRQKKGR TSSGGVVVSG 60 GQQQPPRCQV EGCNLDLSDA KTYYSRHKVC GVHSKTPKVV VNGLEQRFCQ QCSRFHLLPE 120 FDQGKRSCRR RLAGHNERRR KPTSGTLLSA RYGSLPSSIF GNNASSGGFL MDFSSCSRGR 180 VQWPNTTTAD KFPPLPWQGN MDNPPPYINP SVPPGTGFNG VQDSNCALSL LSNHSASRNQ 240 TASHNYYVNT DAGAHFVQPS TQTMVQVHGQ GHFPTSTSGW GYDTNATANL GLGQIPQPGY 300 PGELGLGQQG GRRYDSSADH IDWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	3e-52	SBP family protein