PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005660.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family SRS
Protein Properties Length: 334aa    MW: 35821.1 Da    PI: 7.3262
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005660.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702215.31.4e-661142733154
                 DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsst 89 
                            sg++sCqdCGnqakkdC h+RCRtCCksrgf+C+thvkstWvpaakrrerqq l+  +++ ++s+ a ++skr+r  + + q+     
  Cse_sc005660.1_g020.1 114 SGGVSCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQYLSGGQHDPNRSRrAVSNSKRTRLVQDHDQNPNLVN 201
                            7899**************************************************9999988877745566677776533333332222 PP

                 DUF702  90 klssa.......eskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                            +++++       +s++ le+ ++P+ev ++a frcvrvss+d+ ++++aYq+av+igGh+fkGiLydqG+e 
  Cse_sc005660.1_g020.1 202 QIATTgggaiayNSSSGLEVGNFPSEVTTPASFRCVRVSSIDETDDQFAYQAAVNIGGHLFKGILYDQGPEG 273
                            3222201111114555566666***********************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MAGFFSLGST NNNTSTNPSN PSSNSNPNTD PSSWFLYSTT RPSNTTHENP PTTTKDFELW  60
HQPQPPHDHL NLLAPPPSTT MGDGSRLINF SDESTWGSAA FVMMGHGGGA SGSSGGVSCQ  120
DCGNQAKKDC PHMRCRTCCK SRGFQCQTHV KSTWVPAAKR RERQQYLSGG QHDPNRSRRA  180
VSNSKRTRLV QDHDQNPNLV NQIATTGGGA IAYNSSSGLE VGNFPSEVTT PASFRCVRVS  240
SIDETDDQFA YQAAVNIGGH LFKGILYDQG PEGQYMGGET SSGGSAGIPQ LNLTTTSPGN  300
STAAANFIGH SLYPTLGGND YMTSTQFFHQ ISRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.17e-63SRS family protein