PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005693.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 394aa MW: 43667.9 Da PI: 5.4571

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005693.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	94.5	1.7e-29	55	196	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra... 77 lp+G++F+Ptd el+ e+L++k+ + ++e+i+++d i++ +P++Lp ++++ + ++fF ++ ++y+tg+rk+r+ Cse_sc005693.1_g030.1 55 LPVGVKFEPTDAELL-EHLAAKCGLGNeaphQFIDEFIPTLDmdggICYKHPEELP-GARKDGSCVHFFYRTTNAYTTGQRKRRKicn 140 799**********.8999998766656642223347766555779*****.445667788**************8788 PP NAM 78 ....tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +k+ +W++tgk+k+v++ +g ++g+kk++v+y + k+ k +Wvmh+y+l Cse_sc005693.1_g030.1 141 efglAKDVRWHKTGKTKAVKQ-NGVQIGCKKIMVLYgaAAGGLKPYKLNWVMHQYHL 196 88888899********9.99********43223445669******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MAKSWIVTGR TIARKVKTSS LPLAHQIKDC GATRDCPQCH CKIDNTDVLA QWPGLPVGVK 60 FEPTDAELLE HLAAKCGLGN EAPHQFIDEF IPTLDMDGGI CYKHPEELPG ARKDGSCVHF 120 FYRTTNAYTT GQRKRRKICN EFGLAKDVRW HKTGKTKAVK QNGVQIGCKK IMVLYGAAAG 180 GLKPYKLNWV MHQYHLGTAE DEKEGQYVVS KVFYQPQKEI KKVDNQDEID ELDAWLNKTS 240 PKTPNTATPD PPRPGKSVSY DDITPNNNLS KAQESGWCVE PKDLPSSSNA ESKNNMELPI 300 WEDDSQAVDL DSFDDSLFCN EDFDSHAPLV DSRLYHGTQR GSSLKSDGAP GTSKGECSGV 360 DDLENLDLGT PPDFNLADLP FSSQDSIFGF LERL

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MAKSWIVTGR TIARKVKTSS LPLAHQIKDC GATRDCPQCH CKIDNTDVLA QWPGLPVGVK  60
FEPTDAELLE HLAAKCGLGN EAPHQFIDEF IPTLDMDGGI CYKHPEELPG ARKDGSCVHF  120
FYRTTNAYTT GQRKRRKICN EFGLAKDVRW HKTGKTKAVK QNGVQIGCKK IMVLYGAAAG  180
GLKPYKLNWV MHQYHLGTAE DEKEGQYVVS KVFYQPQKEI KKVDNQDEID ELDAWLNKTS  240
PKTPNTATPD PPRPGKSVSY DDITPNNNLS KAQESGWCVE PKDLPSSSNA ESKNNMELPI  300
WEDDSQAVDL DSFDDSLFCN EDFDSHAPLV DSRLYHGTQR GSSLKSDGAP GTSKGECSGV  360
DDLENLDLGT PPDFNLADLP FSSQDSIFGF LERL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14490.1	2e-90	NAC family protein