PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005701.1_g040.2
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MIKC_MADS
Protein Properties Length: 231aa    MW: 25950.7 Da    PI: 5.8539
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005701.1_g040.2genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.11.5e-25959151
                           S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
                 SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                           k+i n + rqvtfskRr g+lKKAeEL vLCda+va++ifs tgkl+ey+s
  Cse_sc005701.1_g040.2  9 KKIVNITARQVTFSKRRRGLLKKAEELAVLCDADVALVIFSATGKLFEYAS 59
                           678999*******************************************86 PP
2K-box43.81.1e-15951722299
                  K-box  22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                            +++ ke+ +  re+ +l GedL+ Lsl+eLq+Le+ Le +l ++ ++K+e + ++i  lq+k  +l eenk L+++++
  Cse_sc005701.1_g040.2  95 TRMGKEVLEKNRELSQLRGEDLQGLSLEELQRLESMLEGGLHRVLETKDERIANEIASLQQKGFQLMEENKLLKQQMM 172
                            444444444458999************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MAREKIKIKK IVNITARQVT FSKRRRGLLK KAEELAVLCD ADVALVIFSA TGKLFEYASS  60
SMQELLGKYK LHATNNADKA NEPSLQLQLL ETDETRMGKE VLEKNRELSQ LRGEDLQGLS  120
LEELQRLESM LEGGLHRVLE TKDERIANEI ASLQQKGFQL MEENKLLKQQ MMTLISKGKR  180
PRTIATELDN LQVTIHEDQG QSSESVTTNV SGPPPEDDCS DTALKLALPF N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.12e-81MIKC_MADS family protein