PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005776.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 323aa    MW: 37512 Da    PI: 4.611
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005776.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind107.78.9e-34361272102
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            Fl+k+++++ed++ +e++sws++ nsfvv+d+ +f++ +LpkyFkhsnf+SF+RQLn+YgFkkv+ ++         weF+++ F  g
  Cse_sc005776.1_g040.1  36 FLTKIFDMVEDPTSDEVVSWSKTRNSFVVWDSYRFSTALLPKYFKHSNFSSFIRQLNTYGFKKVDPDR---------WEFANEGFLGG 114
                            9****************************************************************999.........*********** PP

                            XXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkks 102
                            +++ll++i+r+++
  Cse_sc005776.1_g040.1 115 QRHLLQTIRRRRN 127
                            **********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MQTVKEEEVT IFSSSSSSSS SPRPKEGLNE VGPPPFLTKI FDMVEDPTSD EVVSWSKTRN  60
SFVVWDSYRF STALLPKYFK HSNFSSFIRQ LNTYGFKKVD PDRWEFANEG FLGGQRHLLQ  120
TIRRRRNVAQ SVQPKQEYST CIEVGQYGIE EELEGLKRER SVLMAEIVRL RQLQQHSKDQ  180
LISIENRLKA TERKQQNMMG FLAKAFSNPE FLQKYMDKNA NKEQKHIEIG RKRRLTMTPS  240
VENLPENIDP FITALFEEEA SSNVGLVEDE SHDNLWEELL NVDLLTEEAP KDFLDDLDGQ  300
QLDWDEDLQE LVDEIEYLRS SNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-106HSF family protein