PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005798.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family TCP
Protein Properties Length: 322aa    MW: 37257.7 Da    PI: 9.1309
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005798.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.47.4e-40982424136
                    TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssasec........eaess 78 
                            kkd hskihT++g+RdRRvRls+++a++fF Lqd LGfdk+skt++WL+ ++k+aik+l++      sss+  +c             
  Cse_sc005798.1_g050.1  98 KKDGHSKIHTAQGPRDRRVRLSIDVARKFFCLQDLLGFDKASKTLDWLFSKSKTAIKDLVEEmkhcsSSSATDRCemvfqetiR---- 181
                            9*************************************************************8887433333555554322121.... PP

                    TCP  79 sssasnsssg....kaaksaa.kskksqksaasalnlak.esrakarararertrekmriknkl 136
                              ++s ++ +    k+++++    k+++   + ++ ++  +sra+arararert+e+ ++k+++
  Cse_sc005798.1_g050.1 182 --NGSDEE-DkhqrKKSATKLfDAKPKKMMRKYKSGVDVnQSRAEARARARERTKENLHNKKRD 242
                            ..111111.12222222222223333333333335555468*******************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MFSSNPFHQQ VPSSIHVFQP SSFFDLEKDG VYVNHQNCNS QFNTGDCFYY APPPVVNSNI  60
LDRQQQVCKE SEFEYCDDNS QLLESVIYHN KKKMVNNKKD GHSKIHTAQG PRDRRVRLSI  120
DVARKFFCLQ DLLGFDKASK TLDWLFSKSK TAIKDLVEEM KHCSSSSATD RCEMVFQETI  180
RNGSDEEDKH QRKKSATKLF DAKPKKMMRK YKSGVDVNQS RAEARARARE RTKENLHNKK  240
RDEESKKVTD NCYRPVSPYS GNNQSSFWSE LASQNYYHDK SCKSIVETKV SMPSSVLYGY  300
QHNLASNDLN SQIKYTSFLN LQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.17e-26TCP family protein