PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005822.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 237aa    MW: 26047.4 Da    PI: 4.6524
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005822.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.1e-173382255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           +y+GVr +k +g++v+eIr p++   r r++lg+++t+e+Aa+a +aa  +l+g
  Cse_sc005822.1_g060.1 33 KYTGVRKRK-WGKFVSEIRLPKS---RDRIWLGSYDTPEKAARAFDAALFCLRG 82
                           8*****999.**********954...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MVKQGSSSSL SSGGSRDRTS NSSSTDQSER ANKYTGVRKR KWGKFVSEIR LPKSRDRIWL  60
GSYDTPEKAA RAFDAALFCL RGSTANFNFP HQPPHIRIPG DKLLSRSEIQ AVAATYASAS  120
STDCITTHDL LSSSTSTSSS EDEESPSPSY VSQLQTDQSD PWTSPLTNLD DDFNSYINSL  180
GDHTIISSST TSVPDFGIYP GFDDYFMPMP PMPSSNNDEY VESDGIYLQG SSLLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-41ERF family protein