PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005854.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 258aa MW: 27157.2 Da PI: 9.6558

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005854.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.7	1e-38	23	123	2	102
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgk 89 ++kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as+++ + + s++n s+++ Cse_sc005854.1_g050.1 23 TVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVAVRSNNNTSITA 110 689******************************************************************9986666666666566664 PP TCP 90 aaksaakskksqk 102 a +++ + s++ Cse_sc005854.1_g050.1 111 ALDQKTAPPVSHH 123 4433333333322 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MSTTDGTTNG VPISSQPGNG VLTVKKPPAK DRHSKVDGRG RRIRMPIICA ARVFQLTREL 60 GHKSDGQTIE WLLRQAEPSI IAATGTGTTP ASFSTVSVAV RSNNNTSITA ALDQKTAPPV 120 SHHHHMLSPA PFLLGKRLRS DDEIDKDDGQ SGNHMGQAVA VSGGGVGGGG GFWALPARSD 180 FGQVWSFAAA PQDMNSMAAA QQQGRFYQQQ QQQVQAMGEA SAARVGNYLP ITQGHLNLLA 240 SLQGPPQQSS GGGKDDNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	3e-66	TCP family protein