PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005953.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 209aa    MW: 24094.2 Da    PI: 9.8729
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005953.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK51.32.3e-1655101652
                 RWP-RK   6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                            + e +++y+++pi++AAk+ ++++T+ K++ R++GI+R P+Rk++s+
  Cse_sc005953.1_g040.1  55 RREIIAQYYYMPIAKAAKKFNIGTTIFKKRYRELGIQRLPYRKLTSI 101
                            67889***************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MIPDDDVNPK DDKKKKRLDI EDSDAEIDMT PADDDQGEAS VPIVKKKATF RKKTRREIIA  60
QYYYMPIAKA AKKFNIGTTI FKKRYRELGI QRLPYRKLTS IQLFINTIQA ENGGANVDGN  120
TQEIITRPQE EKKCVEENPN LEFRKSTKRL RQFYFKSKYK RRKSMSLILS LTNQPTTSAA  180
TQLHYSSKAS SAEHTNSKDG YDSDCSEHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.12e-29Nin-like family protein