PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005963.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 243aa    MW: 27896.9 Da    PI: 9.8695
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005963.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.41.3e-0937115790
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkle.leHnHela 90 
                            A+ +GF ++k+++k++  ng++++ +++C+k g  e + +     +r++++++ +C  +l+ k + +    + +++   HnHel 
  Cse_sc005963.1_g020.1  37 ASGLGFVIVKKRTKSE--NGQMYEINYMCTKGGIYEYHGSG----KRKTKTKKSNCPFRLVAKYRPTRYNLILRVKcDSHNHELL 115
                            7789**9999987666..999***************98877....899999**************98877888888678****96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGGAFGFHEE VSADCPFIRQ EAFRSHAEVT EWVQNIASGL GFVIVKKRTK SENGQMYEIN  60
YMCTKGGIYE YHGSGKRKTK TKKSNCPFRL VAKYRPTRYN LILRVKCDSH NHELLESLHG  120
VPYAMRLKDD ELSLVRELSE YSVRPRNILS TIKGRNPDNV SSVRTIYNAL DKFRRARVGD  180
RAQIQVLYSH LTDSGYAYYP RLSLSIWITG CEITDTCLSR TSPMNIALSA RQQRVELRLT  240
TRC