PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005988.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Dof
Protein Properties Length: 252aa    MW: 28816.3 Da    PI: 4.9033
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005988.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof107.75.8e-342480360
                 zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                            + +kcprC s+ntkfCyynny  +qPryfCkaC+ryWtk G+lrnvP+Gg  rknk+
  Cse_sc005988.1_g020.1 24 PDLVKCPRCGSKNTKFCYYNNYKKTQPRYFCKACKRYWTKDGTLRNVPIGGD-RKNKR 80
                           5679*********************************************986.55554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MSDSEGLEFP KPPSSRKQPQ IQQPDLVKCP RCGSKNTKFC YYNNYKKTQP RYFCKACKRY  60
WTKDGTLRNV PIGGDRKNKR LRLPIIKTTT TMAIRNNLSR DQDSLSPKLS GPNEVYDASN  120
KTSFFEPTCS EWRVDVESYI DMEEFNGLIS WDVDGSFIGC TMQDFAHEDL PKVGLSKPLS  180
SFETSQCSNI PRSFIEMLEN DEDSTITTSS MLSPNCQQTS NILELSSWDC NDLDTLALED  240
MNKPWEDPTF KT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-28Dof family protein