PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006005.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 613aa    MW: 67040.9 Da    PI: 6.5793
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006005.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.66.9e-29200253155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            kpr++W+ +LH++Fv av+qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  Cse_sc006005.1_g020.1 200 KPRVVWSIDLHRKFVAAVNQL-GIEKAVPKRILDLMNVEGLTRENVASHLQKYRL 253
                            79*******************.********************************8 PP
2Myb_DNA-binding36.11.5e-11202252148
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r  W+ +++ ++v av+qlG +   +k+I   m+ +g+t++++ s++qky+
  Cse_sc006005.1_g020.1 202 RVVWSIDLHRKFVAAVNQLGIEkaVPKRILDLMNvEGLTRENVASHLQKYR 252
                            678***********************************************7 PP
3Response_reg77.54.9e-26221301109
                            EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHH CS
           Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeeda 86 
                            vl vdD+p+ ++ll  +l+k +y +v++++++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+++++++
  Cse_sc006005.1_g020.1  22 VLAVDDNPTCLKLLDGLLRKCQY-HVTSTTEAITALQMLRENRnrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDPKLV 107
                            799********************.***************999889*******************87754.558*************** PP

                            HHHHHTTESEEEESS--HHHHHH CS
           Response_reg  87 lealkaGakdflsKpfdpeelvk 109
                             + +  Ga d+l+Kp+  eel++
  Cse_sc006005.1_g020.1 108 MKGITHGACDYLVKPVRLEELRN 130
                            ********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 613 aa     Download sequence    
MTVEEVRGVN NEIDRFPIGM RVLAVDDNPT CLKLLDGLLR KCQYHVTSTT EAITALQMLR  60
ENRNRFDLVI SDVHMPDMDG FKLLELVGLE MDLPVIMLSA NSDPKLVMKG ITHGACDYLV  120
KPVRLEELRN VWQHVIRKKG ESKSQPKSNN NQDKSNHGGE GGQEAGSGDP NGKFNRKRKD  180
EDEDFEDNGN EDDESSTQKK PRVVWSIDLH RKFVAAVNQL GIEKAVPKRI LDLMNVEGLT  240
RENVASHLQK YRLYLKRISQ QANMVVAFGG SKDASSYMRT LDGFSDFRSL SGSGRLPNAA  300
LSSYAPSGML SRLSSATGMT LHSLTSPSMI QPTHTQNLTN SIAPINKFQP VVLQSPQNNQ  360
STNLFQGIPT SFDPGHLQQL NKPNNQLSDF NTIDESRIFN GSNTFSSLGG QSSLNLASSS  420
STFLDVPPPV GNNFHDQLPP DSSLKYGYTA ASNTINGFGS NITSTASVPI EGQGQSQRHG  480
QYGKQMYSQY SGNAFSTLAA AAPPSNVVGL GGPVSQSNDQ ICGVYNRPNG NNSLHMQRNR  540
EAGRSSTELK MGQMGQGEGY LLDQNKLPSG YVASNGYGSL DDLMNGMMKR EQDPTVSMDG  600
EFGFDPYSFG SCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-122ARR-B family protein