PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006033.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 355aa MW: 40361.1 Da PI: 7.0539

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006033.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.1	4e-28	181	235	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt++LH+rF ++v++LGG+ekAtPk+il+lm +gLt+ +vkSHLQkYR+ Cse_sc006033.1_g040.1 181 KTRLKWTQDLHDRFEDCVRSLGGAEKATPKAILKLMCSDGLTIFQVKSHLQKYRM 235 68****************************************************8 PP
2	Myb_DNA-binding	45.4	1.9e-14	183	234	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++ d+v+ lGg t+k+I + m g+t q+ks++qky+ Cse_sc006033.1_g040.1 183 RLKWTQDLHDRFEDCVRSLGGAekaTPKAILKLMCsDGLTIFQVKSHLQKYR 234 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MKRHAAWEHE RDIGITICPT QIIRQIEQED HYQHMISYRQ ETPSCSKGVM EQIGSPDSAL 60 LAIERYLGSI RNSVDQSSNE DTDFSSQPQI ILDNCACPHE NGYLSSYNRS VKIGIPSESE 120 QMRNLKRKAP DKSDVSGCRG SQPSICYNGN HYSGERFSHS RPTSGQVSAG YKNSGTVVSS 180 KTRLKWTQDL HDRFEDCVRS LGGAEKATPK AILKLMCSDG LTIFQVKSHL QKYRMAKYLP 240 VSEKGNLEKS TSIHTIPQIE ISISGMQFKD ALQMQLAVQR QLHEQLEIQR NLQLRIEEQT 300 KQLKKMFDQH NPQKANKSGN SDITFSQDDH HSTNFDNEEI LDFEDDSANT LFHPR

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MKRHAAWEHE RDIGITICPT QIIRQIEQED HYQHMISYRQ ETPSCSKGVM EQIGSPDSAL  60
LAIERYLGSI RNSVDQSSNE DTDFSSQPQI ILDNCACPHE NGYLSSYNRS VKIGIPSESE  120
QMRNLKRKAP DKSDVSGCRG SQPSICYNGN HYSGERFSHS RPTSGQVSAG YKNSGTVVSS  180
KTRLKWTQDL HDRFEDCVRS LGGAEKATPK AILKLMCSDG LTIFQVKSHL QKYRMAKYLP  240
VSEKGNLEKS TSIHTIPQIE ISISGMQFKD ALQMQLAVQR QLHEQLEIQR NLQLRIEEQT  300
KQLKKMFDQH NPQKANKSGN SDITFSQDDH HSTNFDNEEI LDFEDDSANT LFHPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	5e-54	G2-like family protein