PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006050.1_g100.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 205aa    MW: 22819.2 Da    PI: 4.7997
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006050.1_g100.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB52.31.4e-16641431385
                  NF-YB  13 vsrimkkvlPanakiskdaketvqecv.......sefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 
                            +++i+k++lP + ++++d+++++ ec        +efi +++se+++ c re+++ti+++ +l al  lGf +y+e++ +
  Cse_sc006050.1_g100.1  64 MTKIIKEMLPPDVRVARDTQDLLIECCvgpflylAEFINLISSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYA 143
                            789********************999633333336*****************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MVGPGIKFHR RQVARICDYV FVRELKMEPM DIVGKTKEDA SLPKGLFNLI SSSCCASADR  60
TTTMTKIIKE MLPPDVRVAR DTQDLLIECC VGPFLYLAEF INLISSESNE VCSREDKRTI  120
APEHVLKALE VLGFGEYIEE VYAAYEQHKL ETVDTVRAGK CTNGAEMTEE EALAEQQRMF  180
AEARARMNGV AAAPKPPEAE PSLNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.44e-81NF-YB family protein