PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006058.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 160aa MW: 18208.8 Da PI: 7.2672

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006058.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.0009	23	45	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F++ L H+ +H Cse_sc006058.1_g020.1 23 HECKTCKKRFKSYQALGGHQGVH 45 78**********99998888665 PP
2	zf-C2H2	13.5	0.00021	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F + L H+r H Cse_sc006058.1_g020.1 74 HRCKMCTKEFETGQALGGHMRQH 96 79*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MTTEMIVKHL EENSGFPDSD YGHECKTCKK RFKSYQALGG HQGVHKKIKR SEDYDAALCL 60 LSLTGVHTVS SGLHRCKMCT KEFETGQALG GHMRQHRLEK VTKKEGLFQE EEAKGSVESD 120 LESDSVLTMM ELQRHKAEED ERIRVRKELI LAAKELQLGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46080.1	4e-20	C2H2 family protein