PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006058.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 164aa MW: 19395.7 Da PI: 10.2899

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006058.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00036	36	57	1	22
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 y+C+ C+k+F++ L H+ Cse_sc006058.1_g030.1 36 YECKTCKKRFKSFQALGGHQGI 57 99*********99999888765 PP
2	zf-C2H2	17.6	1.1e-05	86	108	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F + +L H+r+H Cse_sc006058.1_g030.1 86 HQCKMCTKVFETGQMLGGHMRKH 108 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MKKTNRKQSD NKCRKMVIFK HLEEKSGFQE TDENGYECKT CKKRFKSFQA LGGHQGIHKK 60 IKPNEDNNVD VMCMLSLNII PTGSLHQCKM CTKVFETGQM LGGHMRKHRD EKALILIKKQ 120 ELWRQKSDSV LTMEEVERRK AEVDERMRVR RELILAAKEL RLWF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46090.1	8e-20	C2H2 family protein