PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006093.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 192aa MW: 22424.1 Da PI: 4.9654

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006093.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.4	1e-27	76	166	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fYn Y+ + GF +rk++ +++k+++ei+++ fvC+k+g+++ ++k+ + ++r rtgC+a+++v+++++g+w+v+k+ +eHnH Cse_sc006093.1_g010.1 76 DFYNGYGLSKGFGIRKNQVYRRKKTNEIYRKIFVCNKQGFKDMNDKRhLGDDVKRRCIVRTGCEAMMQVTMSEHGEWVVDKFISEHNH 163 6***************************************9998857788999******************************* PP FAR1 88 ela 90 +l Cse_sc006093.1_g010.1 164 PLD 166 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MTNQPSLEAM SYSINNSSNE EHIIPDEDEH TLIDEIDTNG YLVDEVDEME PTNVFDQSMR 60 YSVLGKTFEN LDVAYDFYNG YGLSKGFGIR KNQVYRRKKT NEIYRKIFVC NKQGFKDMND 120 KRHLGDDVKR RCIVRTGCEA MMQVTMSEHG EWVVDKFISE HNHPLDPHHM YSNNDLISTS 180 IQQVVSELVW KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-20	FAR1 family protein