PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006097.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 389aa MW: 44618.8 Da PI: 4.7288

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006097.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	106.8	1.7e-33	15	106	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 F+ k+ye+++d+ ++ ++sws++++sfvv+ ++ef+ ++Lp++Fkh+nf+SF+RQLn+YgF+k++ e weF+++ F +g Cse_sc006097.1_g050.1 15 FIVKTYEMVDDPLTDMIVSWSQTNKSFVVWSPREFSGELLPRFFKHNNFSSFIRQLNTYGFRKIDPEL---------WEFANEDFIRG 93 9*************************************************************9877.........******* PP XXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkks 102 + +ll++i+rkk Cse_sc006097.1_g050.1 94 QPHLLKNIHRKKP 106 ********985 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MMNDGHGSSS GLPPFIVKTY EMVDDPLTDM IVSWSQTNKS FVVWSPREFS GELLPRFFKH 60 NNFSSFIRQL NTYGFRKIDP ELWEFANEDF IRGQPHLLKN IHRKKPVHSH SVQNLANNGA 120 SSSSSLTESD KIRYIETINR LQYEKETLSL EFQGHQQEQE RLEQEARALT DRLKRAGKLQ 180 KDILCCLDEF LQKPRHEFEF TPQLVQTNDR KRRMSVSPET STNQVCPFNI PVRESISADA 240 LLALDTELVE QLESSLTLWE GILKDVDDTF EKQRWSLELD HESVSCPDSP TITYPLEDIN 300 IGSKESKIDM NSKPDNAVAT KETSVNLNVN DVFWEQFLTE NPGGSTTNSV EEVAQADIKE 360 VDGRKFWWNM RSVNNLADQL GQLTPAETT

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MMNDGHGSSS GLPPFIVKTY EMVDDPLTDM IVSWSQTNKS FVVWSPREFS GELLPRFFKH  60
NNFSSFIRQL NTYGFRKIDP ELWEFANEDF IRGQPHLLKN IHRKKPVHSH SVQNLANNGA  120
SSSSSLTESD KIRYIETINR LQYEKETLSL EFQGHQQEQE RLEQEARALT DRLKRAGKLQ  180
KDILCCLDEF LQKPRHEFEF TPQLVQTNDR KRRMSVSPET STNQVCPFNI PVRESISADA  240
LLALDTELVE QLESSLTLWE GILKDVDDTF EKQRWSLELD HESVSCPDSP TITYPLEDIN  300
IGSKESKIDM NSKPDNAVAT KETSVNLNVN DVFWEQFLTE NPGGSTTNSV EEVAQADIKE  360
VDGRKFWWNM RSVNNLADQL GQLTPAETT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	5e-92	HSF family protein