PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006159.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 258aa MW: 29533.4 Da PI: 10.5552

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006159.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.6	2.2e-31	58	111	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt+eLH++Fv+av++LGG+++AtPk il++m+vk Lt++h+kSHLQ++R+ Cse_sc006159.1_g020.1 58 PRLRWTNELHQCFVNAVQRLGGENRATPKMILQMMNVKTLTVSHIKSHLQMFRS 111 8****************************************************7 PP
2	Myb_DNA-binding	54	3.8e-17	59	110	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e+++ +v+av++lGg+ t+k I ++m+ k++t ++ks++q+++ Cse_sc006159.1_g020.1 59 RLRWTNELHQCFVNAVQRLGGEnraTPKMILQMMNvKTLTVSHIKSHLQMFR 110 89***********************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MKRLKGESSQ KELQSFFGSM GHSSEGSSRV SRRRRYNCLH ENISRKLMVR SYNRSRAPRL 60 RWTNELHQCF VNAVQRLGGE NRATPKMILQ MMNVKTLTVS HIKSHLQMFR SMKNEVILQE 120 ASKIEQAESC NDNHRGLVNV QDETRERNKH TSFSTSEMNR VEMKWNNTKL KEEGLSSVLD 180 SENLRTTFLR KMELPFAGDK VLYRHFLNNG STSNVSEDTA NAQEPIAVSF SSSTAVDIEL 240 TLGGPYAALR SSCANRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	4e-29	G2-like family protein