PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006222.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 257aa MW: 29126.1 Da PI: 5.3838

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006222.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.7	7.2e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l ++++G ++W I++ g+ R++k+c++rw +yl Cse_sc006222.1_g030.1 14 KGAWSEDEDDKLRGFIERYGHPNWCEIPNLAGLSRSGKSCRLRWMNYL 61 79********************************************97 PP
2	Myb_DNA-binding	46.9	6.6e-15	68	112	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++T+eE++++vd +++ G++ W+ a+ ++ gR+++++k++w+++l Cse_sc006222.1_g030.1 68 GNFTKEEQDIIVDIHRKIGNK-WSMMAAQLP-GRSDNEIKNYWHTHL 112 89*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MVRAPRLDKF GMKKGAWSED EDDKLRGFIE RYGHPNWCEI PNLAGLSRSG KSCRLRWMNY 60 LRPNVKHGNF TKEEQDIIVD IHRKIGNKWS MMAAQLPGRS DNEIKNYWHT HLKNRVNRES 120 TIMRNEHTEI LEPSQACVEG CSIKMSNIKT TQDEVMILLA VLSSQSPSSF STSEMSSCSL 180 SISDYVVSSD VTPQFSNIAA SCWTEPLLLD DEIILSSSEK ILSPLGSTNN LICEASFQDI 240 IMEDVPLWST IDSYSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16490.1	5e-50	MYB family protein