PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006268.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 440aa MW: 49619.1 Da PI: 5.5424

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006268.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.2	6.4e-18	92	182	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k ++ps+v++ +l lpk+f+++h + + ++t++l de+ ++++ k+ ++ l++GW++F a++L +gD +vF+l++ Cse_sc006268.1_g040.1 92 FVKLMLPSHVTRCFWLGLPKNFCDAHL-P-KDDVTVVLVDEDDQEFNTKY--LDRKT--GLSGGWRGFSMAHKLLAGDALVFQLIE-- 171 89**********************4.2.3679************..44433..39********************986.. PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +++v ++r+ Cse_sc006268.1_g040.1 172 QWKMKVYIVRA 182 55567877775 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MAIGPQSKPS DTSPVSAFDV KKKALEIKKN IAHKKTTNPK PKVNFDLSRN LIVSYDPKTD 60 ALAQPLDSQS KSSAIERAKE VQASLPSELP SFVKLMLPSH VTRCFWLGLP KNFCDAHLPK 120 DDVTVVLVDE DDQEFNTKYL DRKTGLSGGW RGFSMAHKLL AGDALVFQLI EQWKMKVYIV 180 RASGLNEIDG ALGLLNLVPC DMNGYQHKNK DASNLQRVEN MDIDLHQDDD QDNGLIMYDQ 240 SVDDTEYADS PVSEGLRFSQ SVIEFKDIKG VDDFSIVVDN LVIDSEIPKH FKIKYYDLCC 300 SQNMYLHENL LKGLNVQLAV GIILETVTIS DAIRACKVTI TRDDIATWDK TLKAFEEVGM 360 KVGFLRARIS KLMGLLFESN ELLEAKRIEQ VKAEEEMRVI KEKLCGVREV IKNLDVEMET 420 LKLKGQKLEP VFHKEANAPW

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MAIGPQSKPS DTSPVSAFDV KKKALEIKKN IAHKKTTNPK PKVNFDLSRN LIVSYDPKTD  60
ALAQPLDSQS KSSAIERAKE VQASLPSELP SFVKLMLPSH VTRCFWLGLP KNFCDAHLPK  120
DDVTVVLVDE DDQEFNTKYL DRKTGLSGGW RGFSMAHKLL AGDALVFQLI EQWKMKVYIV  180
RASGLNEIDG ALGLLNLVPC DMNGYQHKNK DASNLQRVEN MDIDLHQDDD QDNGLIMYDQ  240
SVDDTEYADS PVSEGLRFSQ SVIEFKDIKG VDDFSIVVDN LVIDSEIPKH FKIKYYDLCC  300
SQNMYLHENL LKGLNVQLAV GIILETVTIS DAIRACKVTI TRDDIATWDK TLKAFEEVGM  360
KVGFLRARIS KLMGLLFESN ELLEAKRIEQ VKAEEEMRVI KEKLCGVREV IKNLDVEMET  420
LKLKGQKLEP VFHKEANAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	7e-34	B3 family protein