PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006283.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 161aa    MW: 17696.6 Da    PI: 8.9889
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006283.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-201766255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           +ykGVr +k +g+WvAe+r p++   r r++lg+++taeeAa+a++aa  +l+g
  Cse_sc006283.1_g020.1 17 RYKGVRMRK-WGKWVAEVRQPNS---RDRIWLGSYDTAEEAARAYDAALFCLRG 66
                           69*****99.*******888732...5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MVRPTSSGGK NEKKEGRYKG VRMRKWGKWV AEVRQPNSRD RIWLGSYDTA EEAARAYDAA  60
LFCLRGPSAL INFPTNPPNI PVSADLSPTQ IQVAASRHAR GLSTDSSSLV HVGNPKPTEA  120
QEFSLFNEYG NTSYFPPEEG SGGNSGDNGS VVFETQRLWA Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.12e-30ERF family protein