PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006303.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 169aa    MW: 18899.7 Da    PI: 6.118
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006303.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS34.13.7e-1119168227373
                   GRAS 227 vLklvk...slsPkvvvvveqeadh...nsesFlerflealeyysalfdsleaklpres.eerikvErellgreivnvvacegaerre 307
                            +L++ k    ++  ++++ + e       +++F   f  +l ++ al++s++ ++p++  e+r+ +E  ++++ i++    ++ e + 
  Cse_sc006303.1_g030.1  19 FLSIAKaalATNEGIITFGDGEGHErmeKASDFSSLFDGKLAHCKALYESMDWGFPSHLtEARMIMETLFIAPFISSNFWLQKWE-EG 105
                            55555521145667889988885432336779***********************9987799**************999999998.44 PP

                   GRAS 308 rhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee.sgslvlgWkdrpLvsvSaW 373
                            r+++        + +G+k  p+s +  ++a+ l+++ +   g rv+ +  +++vl W++ p+v vS+W
  Cse_sc006303.1_g030.1 106 RENK-----VSQSIMGLKGRPMSIESLNEARELVKQAEsPYGIRVQGDcGNEMVLEWNTTPIVKVSVW 168
                            4443.....334568***********************8889999966588999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MVGLPHMGKT RKTAQVANFL SIAKAALATN EGIITFGDGE GHERMEKASD FSSLFDGKLA  60
HCKALYESMD WGFPSHLTEA RMIMETLFIA PFISSNFWLQ KWEEGRENKV SQSIMGLKGR  120
PMSIESLNEA RELVKQAESP YGIRVQGDCG NEMVLEWNTT PIVKVSVWV