PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006338.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 100aa    MW: 11657.4 Da    PI: 10.1425
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006338.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.31.9e-161186174
                   FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdg 74
                           +fYn+YA++ GF+ rks+++k  +++ it++ f Cskeg++ ++  +   + + +r ++++rtgC+a++ +k+++++
  Cse_sc006338.1_g020.1 11 EFYNNYARKNGFEPRKSSENKG-KHRVITQKYFLCSKEGQNPKTYANtliEPTGKRVTTSKRTGCEARIILKLNRNK 86
                           6*****************9998.6667***************9999989888899999**************99765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MLFDSLDQAF EFYNNYARKN GFEPRKSSEN KGKHRVITQK YFLCSKEGQN PKTYANTLIE  60
PTGKRVTTSK RTGCEARIIL KLNRNKCEAM QLLWSICDRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.17e-09FAR1 family protein