PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006446.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 238aa    MW: 25785 Da    PI: 6.5846
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006446.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.2e-1960110155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            + ++GVr++  +g+WvAeIr+p   + r kr +lg+f +a eAa a+++a+++++g
  Cse_sc006446.1_g060.1  60 CSFRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFASAVEAALAYDEAARAMYG 110
                            579****999.**********8...3.35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MDNLAKKQKR KRTEGPKIVA ETIAKWVKIN KDAKTTRKAP AKGSTKGCMK GKGGPENGKC  60
SFRGVRQRTW GKWVAEIREP NRGKRLWLGT FASAVEAALA YDEAARAMYG PSARINLPNY  120
CPDASLLSKT ASSRGSTITC SQSESSKVRE SKTGLESQNV CQASASEVDV TGICNDDSYY  180
QGFPEDEMID IDELLGLTDD QKGESINEAG SSVITGPEEC GFTLEEFGLS LDPAEPVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.15e-38ERF family protein