PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006528.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family YABBY
Protein Properties Length: 220aa    MW: 24425.7 Da    PI: 7.6188
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006528.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY2351.7e-72151842170
                  YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnveke 89 
                            ++  +seq+CyvqCnfC+t+lavsvP +slf++vtvrCGhCt+llsvn++      ++  +   + + +l ++  ++++ ++++  + 
  Cse_sc006528.1_g010.1  15 HLSPTSEQLCYVQCNFCDTVLAVSVPCSSLFTTVTVRCGHCTNLLSVNMRALLFPASVATN-AAANQFHLGHNFFSAQSLMEEMRNTP 101
                            56789*****************************************998887744444443.23333344444444444444433333 PP

                  YABBY  90 esa..stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                             +   ++ +++ ++   + +e+p++p ++rPPekrqrvPsaynrfikeeiqrika+nPdishreafsaaaknWahfP+ihfgl
  Cse_sc006528.1_g010.1 102 ANLflNQPNPNDHFGPVRVDELPKPPVANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 184
                            332112334445556667899***999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MSSSASFSPD HHHHHLSPTS EQLCYVQCNF CDTVLAVSVP CSSLFTTVTV RCGHCTNLLS  60
VNMRALLFPA SVATNAAANQ FHLGHNFFSA QSLMEEMRNT PANLFLNQPN PNDHFGPVRV  120
DELPKPPVAN RPPEKRQRVP SAYNRFIKEE IQRIKAGNPD ISHREAFSAA AKNWAHFPHI  180
HFGLMPDQPV KKPNVCQQDG EDLLMKDGFL ATANVGVSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.16e-88YABBY family protein