PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006540.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 178aa    MW: 19615.9 Da    PI: 4.584
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006540.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.4e-201060256
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                           +y+GVr ++ +g++vAeIrdp +   ++r++lg+f tae+Aa+a++aa+ +l+ge
  Cse_sc006540.1_g030.1 10 RYRGVRKRP-WGKYVAEIRDPLK---KARVWLGTFNTAEDAARAYDAAAINLRGE 60
                           59*******.**********743...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MPPPSATAIR YRGVRKRPWG KYVAEIRDPL KKARVWLGTF NTAEDAARAY DAAAINLRGE  60
KAKTNFSAEN IHEDVLVVQH QQRPTSSSMS STVDESLSGP RVVKPVVKLK PVVVVGVDGD  120
ECCDYCDSSS SVVVDEGDDE VEGVENDSKK SVFMFDLNEL PKDEGDGEEE HCCTELRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.11e-22ERF family protein