PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006612.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 389aa    MW: 43214.8 Da    PI: 4.8076
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006612.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.52.7e-27163216155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            kpr+ Wt +LH++Fv+av+qL G+++A+Pk++lelm+v+gL + +v+SHLQkYR 
  Cse_sc006612.1_g020.1 163 KPRMAWTADLHSQFVDAVKQL-GIKNAVPKKVLELMNVPGLGRGNVASHLQKYRK 216
                            79*******************.********************************6 PP
2Myb_DNA-binding38.23.2e-12165215148
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r++WT++++ ++vdavkqlG +   +k++ + m+  g+ + ++ s++qky+
  Cse_sc006612.1_g020.1 165 RMAWTADLHSQFVDAVKQLGIKnaVPKKVLELMNvPGLGRGNVASHLQKYR 215
                            789*******************9************9999999********7 PP
3Response_reg333.2e-1226126198
                            EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESS.CTTSEHHHHHHHH.HHHTTTSEEEEEESTTTHH CS
           Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDie.mpgmdGlellkei.reeepklpiivvtahgeee 84 
                            vl+vd +p+ +  l+++l+  +y +v++++ ++eal+l+k+ +  +D++++ +   p+++G+e+l+ i re +    +i ++  +++e
  Cse_sc006612.1_g020.1  26 VLVVDNDPDSLLHLTEMLTACQY-QVTTCSLPTEALQLIKDDNnkFDMVITEVHfTPDINGVEFLEIIvRETGLPGACICISKPAKKE 112
                            89*********************.***************877777*******873689**********88877999999999999888 PP

                            HHHHHHHTTESEEE CS
           Response_reg  85 dalealkaGakdfl 98 
                             ++   +  a+++l
  Cse_sc006612.1_g020.1 113 VIQFLWQHVARRML 126
                            88777777666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MISSSDNSPM KPLSIEDSFD PHGLKVLVVD NDPDSLLHLT EMLTACQYQV TTCSLPTEAL  60
QLIKDDNNKF DMVITEVHFT PDINGVEFLE IIVRETGLPG ACICISKPAK KEVIQFLWQH  120
VARRMLNNEP CSSITAEDKE FSGSSGSDDV QMDDDQTKDQ AKKPRMAWTA DLHSQFVDAV  180
KQLGIKNAVP KKVLELMNVP GLGRGNVASH LQKYRKSLQV LSTNMPQRFT KQSSFSSDAY  240
SPVFKYNDSF ISTQPITEVQ QDDSSIQAPG GANSQVIENN GLFTTNSPIT ELQQPFMAQD  300
SSAQLVPSGA YHPVIEKDWL VGCPPITDNE LQILQQFEFD NPLSPFHDPD YCFCANGSSY  360
FAKPGRMPKA HSGLVVTPWI QNTLKTWSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01760.13e-42ARR-B family protein