PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006688.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 216aa    MW: 24344.1 Da    PI: 6.7864
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006688.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.000694365123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           y+C+ C+k+F     L  H  +H
  Cse_sc006688.1_g020.1 43 YQCKECNKTFEKFQALGGHKASH 65
                           9*********9988887777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MEYSNKRIRN GLSAESYARK NLNEIVKKIE EDPNVPDPRA CVYQCKECNK TFEKFQALGG  60
HKASHKRKRD GSSTSQMFLH ECKVCGEKFE IGQALGGHMR KHQGMKHEVG ELKNTGGDNV  120
GHVLQQPKVE ALQELKVEAL QEIKVEALQE QKAKSDRSEG VISKGDNFKE ETSTSDSGRQ  180
EFQFCDLRVP ADEDEGTSHT ANQTHTYYEF LKPADA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.14e-19C2H2 family protein