PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006688.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 164aa    MW: 18620.9 Da    PI: 9.3372
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006688.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.95.4e-06105125425
                            ---SGGGGTS--TTTTT-SS-S CS
                zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                            ++C+ff r G+Ck+G+ C + H
  Cse_sc006688.1_g050.1 105 RICSFFIR-GECKRGAECAYRH 125
                            68**9999.*********9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MPAQAPPKQK QILISARSAL APSQSSGGDL AEMQDTRKVR DTALSINSND AIPKSDVNRE  60
YFAEEHDHRA RAGLDYESSY GKVQPNDTIT KLKWTTPYYK RNQARICSFF IRGECKRGAE  120
CAYRHEIPVT GELSQQNIKD RYYGYVRSPP SHLLCTQRIV DALR