PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006698.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 304aa    MW: 34266.2 Da    PI: 7.1859
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006698.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.89e-171462148
                           TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                           +g+W++eEd +l+++++ +G+g +W + +++ g++R++k+c++rw++yl
  Cse_sc006698.1_g010.1 14 KGPWSPEEDTRLKEYIQTHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
                           79*********************************************97 PP
2Myb_DNA-binding33.69.1e-1169111246
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            g ++ +Ed+ +  +++  G++ W+  a+ ++ gRt++++k++w++
  Cse_sc006698.1_g010.1  69 GEFSDDEDKVICALFASIGSR-WSIMAAQLP-GRTDNDIKNYWNT 111
                            789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDTRLKEYIQ THGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPDIKHGE FSDDEDKVIC ALFASIGSRW SIMAAQLPGR TDNDIKNYWN TKLKKKMMMM  120
NTIVSMPDIR KPSLYNHLQS LNTSTNYSYP SLSYFHNSNA PLSSSYNMYS PNTNSSYHDQ  180
TLSISSSPTK TVPVLQSQEH GHLGLGPMES YQGVKDSSNL VRFGGDQASC SSNSDGSGHY  240
VYDTYKEFVG SYEKEKGYYE DASLDSSLEE IKQLISTNLC SSNIDNNLNF FGDETKEVEK  300
VMYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.12e-70MYB family protein