PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006722.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 261aa    MW: 29968.7 Da    PI: 6.7796
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006722.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.94.8e-131461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg+WT eEd +l   +   G  +W+ +++  g+ R++k+c++rw +yl
  Cse_sc006722.1_g090.1 14 RGPWTMEEDRKLMSFIINNGIQCWRMVPKLAGLLRCGKSCRLRWINYL 61
                           89******************************99************97 PP
2Myb_DNA-binding52.61.1e-1667110146
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            rg  ++ E++++++++++lG++ W++Ia++++ gRt++++k++w++
  Cse_sc006722.1_g090.1  67 RGTLSEAEEDQIIELHARLGNR-WSKIASHFP-GRTDNEIKNHWNT 110
                            678899****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGRKPCCDRA GLKRGPWTME EDRKLMSFII NNGIQCWRMV PKLAGLLRCG KSCRLRWINY  60
LRPDLKRGTL SEAEEDQIIE LHARLGNRWS KIASHFPGRT DNEIKNHWNT RIKKKLKLLG  120
VDPNTHKHTD EEKKQDSGEK KGQCAIMSKA ENTKVDCGKV DEPEHEKDLT SKIHDNMVSK  180
SIDIDSWTNT NQENSTSISK SDTYSHSFED SFSINPHSSI GDSSLFEGDY SLEQWVDGGD  240
SLLLWDCFNQ QEDLFVFLGN Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.12e-82MYB family protein