PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006750.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 198aa    MW: 22533.1 Da    PI: 6.0228
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006750.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB178.27.7e-5627122297
                  NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 
                            +eqdrflPianv+rimkkv+Pan+kiskdaketvqecvsefisf+t+easdkcq ekrktingdd++wa++tlGfe+yv+plk+yl+k
  Cse_sc006750.1_g020.1  27 KEQDRFLPIANVGRIMKKVIPANGKISKDAKETVQECVSEFISFITGEASDKCQIEKRKTINGDDIIWAITTLGFEEYVDPLKQYLSK 114
                            89************************************************************************************** PP

                  NF-YB  90 yrelegek 97 
                            yreleg+k
  Cse_sc006750.1_g020.1 115 YRELEGDK 122
                            ******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MEDGRQGKRN LENPSSKNND NNNHHNKEQD RFLPIANVGR IMKKVIPANG KISKDAKETV  60
QECVSEFISF ITGEASDKCQ IEKRKTINGD DIIWAITTLG FEEYVDPLKQ YLSKYRELEG  120
DKVNNTMPKQ HQCIEQQQYN ATTSFPFENV YSSSAASIMS QTPFLTASDQ AFALPFSPSS  180
IQTQLHNQQE SIDSVRHW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G13570.13e-65NF-YB family protein