PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006767.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 221aa    MW: 25055.4 Da    PI: 8.4954
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006767.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.3e-171661147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+WT+eEd +l+++v+  G ++W+ I + ++ gR++k+c++rw + 
  Cse_sc006767.1_g060.1 16 KGSWTPEEDAKLIQLVETQGARNWSVIGSSIP-GRSGKSCRLRWCNQ 61
                           799*****************************.***********985 PP
2Myb_DNA-binding43.47.8e-1470112347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++T+ Ed+ +++a   +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc006767.1_g060.1  70 PFTPHEDDVILRANLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 112
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MSSSSSNDDV NLLNKKGSWT PEEDAKLIQL VETQGARNWS VIGSSIPGRS GKSCRLRWCN  60
QLSPNVQHRP FTPHEDDVIL RANLIHGNKW SVISKLLPGR TDNAIKNHWN STLRRRGLTR  120
FSSECESTQS DDECLGLKKN KWRRCVSVSD VSSCDGMTVL TLLPPGDGEK KKGGDEVEKE  180
IDYTCLVDVM KKMIAKEVRN LFLEKNNIRQ PVWFKENQLD D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.11e-46MYB family protein