PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006817.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 168aa    MW: 18716 Da    PI: 10.4131
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006817.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.21.4e-054264123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           y+C++C++ F ++  L  H++ H
  Cse_sc006817.1_g040.1 42 YECHYCNREFENSQALGGHQNAH 64
                           99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MVEKPKRSTI KLFGIIVSND QDTFSSSYSS SSSSSSSDGR KYECHYCNRE FENSQALGGH  60
QNAHKEERQH LKRPQFHPNK KSFAPHKGPV IVPSTANASP PWIYLPYHAP TSMMSMRRHR  120
RLSCTSGVRM STVISIGPQP NANYDDGPSL SRLSNGSGGP RIDLRLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.13e-13C2H2 family protein