PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006836.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 127aa    MW: 14530.4 Da    PI: 10.2825
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006836.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.6e-05426123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           y+C+ C++ F r+  L  H++ H
  Cse_sc006836.1_g040.1  4 YRCNFCKRKFYRPQALGGHQNAH 26
                           9*******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MKVYRCNFCK RKFYRPQALG GHQNAHRRER DTARRDLSLQ TTGLPVASMV NRSLGIQAHS  60
LAHPPSRDGE TTIARFADNG SRYGVTWLQP NDEEETVRLK WPSGFHFEAH APSQQSVQQM  120
LDLNLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.17e-18C2H2 family protein