PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006858.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 442aa MW: 51445.9 Da PI: 6.5088

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006858.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.9	5.6e-55	53	182	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPtdeelv++yL+kk+++ +++l +vi++vd+yk+ePwdL++ ++ + +++ewyfFs++dkky+tg+r+nrat++g+Wka Cse_sc006858.1_g050.1 53 VPPGFRFHPTDEELVDYYLRKKINSIRIDL-DVIRDVDLYKIEPWDLQElcRLGTeDQNEWYFFSHKDKKYPTGTRTNRATTAGFWKA 139 69**************************.9***********954544442556************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 tg+dk+++s k+ lvg++ktLvfykgrap+g+k+dW+mheyrle Cse_sc006858.1_g050.1 140 TGRDKAIYS-KHDLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 182 *****.8899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MGYLLGNQIE YKSFLAISTF GPKLLNSVNQ SRQIGLLQIP VSVREEMNTF SHVPPGFRFH 60 PTDEELVDYY LRKKINSIRI DLDVIRDVDL YKIEPWDLQE LCRLGTEDQN EWYFFSHKDK 120 KYPTGTRTNR ATTAGFWKAT GRDKAIYSKH DLVGMRKTLV FYKGRAPNGQ KSDWIMHEYR 180 LESDENATTN QVRRCPYLNL NDHMPIYLAG LNNLSLIFLI WKQEEGWVVC RVFKKRLPTM 240 RRASEHESPI WYEDHQVSFM PEIDSPDQNN SISHLVQPNL QYPFSSCKKE LDHLQNYQIN 300 PDHYLQLPLL ESPKLLPSCN SSMPIYSIDI NQAGSINYQP SSITNNKNIH KTQDQNVNNH 360 VTDWRVLDKF VASQLLSQGD VSTKENHYTN TEDTIPSFHS QDDHETSNCE LIAHMNKQDS 420 EMPMVPEDAS RSISSCHIDL WK

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MGYLLGNQIE YKSFLAISTF GPKLLNSVNQ SRQIGLLQIP VSVREEMNTF SHVPPGFRFH  60
PTDEELVDYY LRKKINSIRI DLDVIRDVDL YKIEPWDLQE LCRLGTEDQN EWYFFSHKDK  120
KYPTGTRTNR ATTAGFWKAT GRDKAIYSKH DLVGMRKTLV FYKGRAPNGQ KSDWIMHEYR  180
LESDENATTN QVRRCPYLNL NDHMPIYLAG LNNLSLIFLI WKQEEGWVVC RVFKKRLPTM  240
RRASEHESPI WYEDHQVSFM PEIDSPDQNN SISHLVQPNL QYPFSSCKKE LDHLQNYQIN  300
PDHYLQLPLL ESPKLLPSCN SSMPIYSIDI NQAGSINYQP SSITNNKNIH KTQDQNVNNH  360
VTDWRVLDKF VASQLLSQGD VSTKENHYTN TEDTIPSFHS QDDHETSNCE LIAHMNKQDS  420
EMPMVPEDAS RSISSCHIDL WK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	2e-97	NAC family protein