PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006861.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 254aa MW: 28871.5 Da PI: 6.2591

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006861.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.6e-17	19	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed ll ++++++G g W++I+ + g+ R++k+c++rw++yl Cse_sc006861.1_g010.1 19 KGAWTPQEDMLLRNCIQKHGEGKWHLIPLKAGLSRCRKSCRLRWLNYL 66 79********************************************97 PP
2	Myb_DNA-binding	46.6	7.9e-15	72	116	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g + ++E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++ Cse_sc006861.1_g010.1 72 KGDFEEDEIDLILRLHKLLGNR-WSLIAGRIP-GRTANDVKNYWNTH 116 67899***************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
EHRKMRPSSS SCTGLSLRKG AWTPQEDMLL RNCIQKHGEG KWHLIPLKAG LSRCRKSCRL 60 RWLNYLRPNI KKGDFEEDEI DLILRLHKLL GNRWSLIAGR IPGRTANDVK NYWNTHIRPR 120 SKKQNNEAKD ITTAVTVIKP QPRILSKTVN SNPPIAAPQD YNLVRSTHDG VETAFDISSG 180 LISSPIVSDA KIDKYLVELF DNEDKEFDGE IGWSLDGSPF EGEALDAEQE DGESSVFDLP 240 IDEFTWDFLN SDQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-60	MYB family protein