PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006899.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 204aa    MW: 23416.9 Da    PI: 4.4427
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006899.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-1869119255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                             y+GVr ++ +g+++AeIrd ++ng   r++lg+f+tae Aa a+++a+  l+g
  Cse_sc006899.1_g030.1  69 AYRGVRKRP-WGKYAAEIRDSTQNG--IRVWLGTFDTAEAAALAYDQAAYVLRG 119
                            69*******.**********77787..**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MDPSYFYNPM PSFSPPEYYS NHHFLPFNEN DSQDMLLYGV IADSAGQTQY CPAEPVRYQE  60
EKEEEKESAY RGVRKRPWGK YAAEIRDSTQ NGIRVWLGTF DTAEAAALAY DQAAYVLRGS  120
SAVLNFTEDI AYESLKDMGY MYEEGTSPVL ALKRMHSIKR KNEMKSKKRE DTKDENVVVF  180
EDLGSDYLEE LLGVDDGCNT STRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-58ERF family protein