PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006960.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 207aa    MW: 22092.6 Da    PI: 8.2123
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006960.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.68.5e-1555105155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            ++y+GV  ++ +gr +A Irdp   gk+++++lg+f+ta++Aa a++ a++kl g
  Cse_sc006960.1_g020.1  55 PHYRGVLKHP-WGRHAALIRDP---GKKTSIWLGTFDTAQQAALAYDSAARKLQG 105
                            68********.**********8...557************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MVVVCGGVAC WCCCLLVLLL VVLLLVVVDC DTCGGMRPVA SLLVGVVATN GPEEPHYRGV  60
LKHPWGRHAA LIRDPGKKTS IWLGTFDTAQ QAALAYDSAA RKLQGNKAKT NFPNPNHLLF  120
PAAPLPPEAL ELRLSKALEL RLSSYSSGGH GATAGPMFMY LPGVINNDIH NNVNMSYETS  180
AGGSSNSGYS ECSKSMKLKL DLNFPPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.13e-20ERF family protein