PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006987.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 216aa MW: 24637.8 Da PI: 7.575

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006987.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.2	3.2e-19	66	146	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y++YA e+GF vr+ ++++ g +++++f Cskeg+++ + k r r+e rt+Ckak+ v ++ ++k++v+++ +eHnH + Cse_sc006987.1_g040.1 66 AYKDYAAEAGFIVRRGHQTND--GGIVINKQFLCSKEGTKKVKAVK-----RIRSEFRTNCKAKIYVVRS-SEKYRVKHFAEEHNHGF 145 5*************98877..99**********9998777.....9999********999.9************98 PP FAR1 90 a 90 + Cse_sc006987.1_g040.1 146 F 146 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFTSTSML IKPVVVKTVV PVEDTLFDSV 60 EEAYNAYKDY AAEAGFIVRR GHQTNDGGIV INKQFLCSKE GTKKVKAVKR IRSEFRTNCK 120 AKIYVVRSSE KYRVKHFAEE HNHGFFTAED RHLQKSHRSM SLAHQYFAIK ASNLNIGPCM 180 SFNFIAELLG GYENVGATKI DFKNMSRDIY SYIGKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-15	FAR1 family protein