PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007009.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family G2-like
Protein Properties Length: 260aa    MW: 28551.8 Da    PI: 7.0971
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007009.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.11.3e-3066119155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Cse_sc007009.1_g020.1  66 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 119
                            59*******************.********************************8 PP
2Myb_DNA-binding48.52e-1568118148
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
  Cse_sc007009.1_g020.1  68 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 118
                            789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MKEDENEANW FSKWEQELPS PDELTPLSQS LITPHLAIAF NIQNNSNSGD LDSSSPGDEP  60
ARTLKRPRLV WTPQLHKRFV DAVAHLGIKN AVPKTIMQLM SVDGLTRENV ASHLQKYRLY  120
LKRMQGFSNG AAASAGDPAT DHLFASSPVP AHFLRSNSDH YLPYVPVAAL QHQQQQLVAA  180
AGVQLQARYG QMGHFGSPRN GQFEHSFLSR QNSSIQQGQV QGVQRVGTSP VNNSVVSSYG  240
EEVEGANGRK VLTLFPTGDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05090.17e-64G2-like family protein