PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007023.1_g110.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 351aa MW: 39840 Da PI: 8.3843

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007023.1_g110.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	3.8e-16	20	68	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d+++++G+g +W + ++++g +R++k+c++rw++yl Cse_sc007023.1_g110.1 20 KGPWSPEEDAKLKDYIEKYGTGgNWIALPQKIGIKRCGKSCRLRWLNYL 68 79*****************************55**********97 PP
2	Myb_DNA-binding	37.5	5.4e-12	75	117	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Cse_sc007023.1_g110.1 75 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 117 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
HKKLRKMGRA PCCDKANVKK GPWSPEEDAK LKDYIEKYGT GGNWIALPQK IGIKRCGKSC 60 RLRWLNYLRP NIKHGGFSEE EDNIICSLYI SIGSRWSIIA AQLPGRTDND IKNYWNTRLK 120 KKLLGRRKQS HASRLSGSTQ DPKDGNGMET LSNSAIERLQ LHMQLQNLEN PNMSHGSNLT 180 MWPCKLNPIQ EKMMQNLQLL NESSNPLLMQ HVLSSSPQKV ELCGPSTNRL QQVYSLSNDM 240 LVNQMNNSMN GINIPSSSPH IPESDGIKQP SMEFQQYLAF QAEIDEFLTN KGANSVSLDQ 300 TQANEIDCFK DMDSAKDMMT WWSNEFDANS ASSNSWDSNG VVDHQQRELK Y

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

HKKLRKMGRA PCCDKANVKK GPWSPEEDAK LKDYIEKYGT GGNWIALPQK IGIKRCGKSC  60
RLRWLNYLRP NIKHGGFSEE EDNIICSLYI SIGSRWSIIA AQLPGRTDND IKNYWNTRLK  120
KKLLGRRKQS HASRLSGSTQ DPKDGNGMET LSNSAIERLQ LHMQLQNLEN PNMSHGSNLT  180
MWPCKLNPIQ EKMMQNLQLL NESSNPLLMQ HVLSSSPQKV ELCGPSTNRL QQVYSLSNDM  240
LVNQMNNSMN GINIPSSSPH IPESDGIKQP SMEFQQYLAF QAEIDEFLTN KGANSVSLDQ  300
TQANEIDCFK DMDSAKDMMT WWSNEFDANS ASSNSWDSNG VVDHQQRELK Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-90	MYB family protein