PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007102.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 226aa MW: 26272.8 Da PI: 10.2806

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007102.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.6	1.5e-16	70	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfY++YA+e GF+vr+ k s +n +k+t + + ++++ ++ + +rr+ra++r+ C+akl++k+++++kw+ +k+ ++HnH Cse_sc007102.1_g020.1 70 KFYKDYAREGGFEVRRGGVKLSANNL--KKKTNNVETNESQSHVGSE-VIKRRKRASQRCRCQAKLRIKRTSKNKWVAYKFLEKHNHR 154 6***************99996655..4555444444455555555.889*********************************** PP FAR1 89 la 90 l+ Cse_sc007102.1_g020.1 155 LV 156 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MNTTTSDLQG EPSTPISNNN LQHPVIHDDQ SVPQVGSYQP TPEGSKFWVQ DAKNKLVEGT 60 EFDTLEIALK FYKDYAREGG FEVRRGGVKL SANNLKKKTN NVETNESQSH VGSEVIKRRK 120 RASQRCRCQA KLRIKRTSKN KWVAYKFLEK HNHRLVREED YMYLKVARKL SFPQQQLLYH 180 LYNANLGPTR AWKVLKEIYG RFENTGVTDV ECRNYKRGLN NFIGKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-16	FAR1 family protein