PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007125.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 237aa    MW: 26975.1 Da    PI: 8.3339
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007125.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.53.2e-183378147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+WT eEd++l ++v ++G ++W++I++++  gR++k+c++rw + 
  Cse_sc007125.1_g030.1 33 KGPWTNEEDKILTRLVDRYGARNWSLISKYIK-GRSGKSCRLRWCNQ 78
                           79*****************************9.***********985 PP
2Myb_DNA-binding52.11.5e-1687129347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +++  Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ 
  Cse_sc007125.1_g030.1  87 PFSRAEDETILMAHAKYGNR-WATIARLLP-GRTDNAVKNHWNST 129
                            78999***************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEPFNWPTSS SSGSSSSDTS HSGQKPQNSN LIKGPWTNEE DKILTRLVDR YGARNWSLIS  60
KYIKGRSGKS CRLRWCNQLS PHVQHRPFSR AEDETILMAH AKYGNRWATI ARLLPGRTDN  120
AVKNHWNSTL KRRQLHSDTN LYQNEIDDDF KINLSVGRSA NVCTLSPNNV GVVVEEFDPM  180
TTLTLATPGM SGYETAENKP GSLPIEFWDE MRNVIAREVR EYVTTSFHET HSFIEKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.11e-54MYB family protein