PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007159.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family CAMTA
Protein Properties Length: 231aa    MW: 25874.8 Da    PI: 6.1156
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007159.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-166.93.2e-215410169116
                   CG-1  69 dhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116
                            +he+LKv  +e+l+cyYah+eenp+fqrr+yw+Le ++e+ivlvhy +
  Cse_sc007159.1_g010.1  54 THERLKVARIEALNCYYAHGEENPNFQRRSYWMLEPAKEHIVLVHYSD 101
                            6*********************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MGALIHSLRF SGYNIEVLVQ EAQFRWLRPA EVLFILQNYE ETQLNHEPPQ KPQTHERLKV  60
ARIEALNCYY AHGEENPNFQ RRSYWMLEPA KEHIVLVHYS DITIGSLVTV TKSGAHNIYI  120
PPLSLSDVGR GQGSSYIHDG NLSHEVGGVS GQAPSIGDMA RDNVSRPSGV THSYSHDQSA  180
PSWNALNKRD SSTMMIDSDN AQEFVGGEFG WNDSSEVSSK KYKIMVVTND N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-31CAMTA family protein