PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007159.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 151aa MW: 17720.3 Da PI: 8.0001

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007159.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.7	9.5e-12	6	47	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +W++eEde l ++++++ + W++++ ++ gR+ k+c srw+ Cse_sc007159.1_g030.1 6 EPWSPEEDEMLDNLFEKHRFN-WSLVSMSIP-GRSHKSCWSRWL 47 58*****************.*****.*********7 PP
2	Myb_DNA-binding	40.4	6.6e-13	65	105	5	47
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++eEde+l ++v+++G + W++I++ + g++ + ck rw+++ Cse_sc007159.1_g030.1 65 SPEEDEILQNLVEKHGRN-WSLISKSIL-GKSVNTCKFRWLSL 105 89************66.****9.*********976 PP
3	Myb_DNA-binding	34.6	4.4e-11	109	150	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +T+ Ed+ l ++v ++G++ W+++++ ++ + +k ck+rw+++ Cse_sc007159.1_g030.1 109 FTPKEDKMLQNLVVKHGSN-WSLVSKSIP-DKLAKTCKLRWLSL 150 9**************99.*****.9********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MDQIEEPWSP EEDEMLDNLF EKHRFNWSLV SMSIPGRSHK SCWSRWLLHD SHQKKDMDLT 60 GGPCSPEEDE ILQNLVEKHG RNWSLISKSI LGKSVNTCKF RWLSLQWSFT PKEDKMLQNL 120 VVKHGSNWSL VSKSIPDKLA KTCKLRWLSL Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	1e-17	MYB family protein