PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007159.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 207aa MW: 23814.5 Da PI: 6.7934

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007159.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.7	5.6e-13	6	48	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+W++eEde l ++++++G++ W +I++ + gR++ +c sr+++ Cse_sc007159.1_g050.1 6 GPWSPEEDEMLRNLIRKHGSN-WPLISKSIS-GRSGDSCWSRLLS 48 89***************99.*****.********986 PP
2	Myb_DNA-binding	41.6	2.8e-13	52	92	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++T+eEd l ++v+++G + W++I++ ++ g +++ c++rw+ Cse_sc007159.1_g050.1 52 SFTPEEDRMLQNLVEKHGHN-WSLISNSIP-GTSANTCRLRWL 92 79**************88.*****.*********6 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MDQIEGPWSP EEDEMLRNLI RKHGSNWPLI SKSISGRSGD SCWSRLLSLY LSFTPEEDRM 60 LQNLVEKHGH NWSLISNSIP GTSANTCRLR WLFVHRPFTP EEDETNYEDI TISDRNYFLH 120 KVCYINRVLG KMARDNVSQL SVGMPTFKRT LFPFSGHERP QQIYTTATSE TLWNLNTNGT 180 QGNSRFHLAM ETGSQNSIHQ GNSGHEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	6e-19	MYB family protein