PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007159.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 369aa MW: 41531 Da PI: 5.8923

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007159.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.7	1.1e-12	46	99	4	47
S-HHHHHHHHHHHHHTTTT...........-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...........tWktIartmgkgRtlkqcksrwqky 47 W++eEde l +vk++G+ +W++I++ ++ g + + c srw+++ Cse_sc007159.1_g070.1 46 WSPEEDEMLESLVKKHGPInlfsekkhgpiNWSLISKSIP-GQSVETCMSRWFSL 99 ***************66*****************.*********976 PP
2	Myb_DNA-binding	37.5	5.4e-12	103	142	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +T+eEde l ++++++G++ W++I++ ++ g+++ +c rw+ Cse_sc007159.1_g070.1 103 FTPEEDEMLQNLFEKHGPN-WSLISKSIP-GKSARMCDFRWY 142 9**************77.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MPYYENRKKT NRGWIRDDRN IFWGHSCLSR WLSLLQIEVD QIKILWSPEE DEMLESLVKK 60 HGPINLFSEK KHGPINWSLI SKSIPGQSVE TCMSRWFSLQ WSFTPEEDEM LQNLFEKHGP 120 NWSLISKSIP GKSARMCDFR WYAVWNPLWN STLMWKSSSM TNEDITIGAR IPPPSFSNIG 180 RRQVSSYIHA GNINHEVGGV SGQAPSVDDM ARNNVSQPLG STHYYSRGQG SSYIHEGNLS 240 YEVGGVSGQA PSVGDMARYN VSQPWVGTHS YSHGQGSSDI HDRNLSHEVG GVSGQAPSIG 300 DTVRNNVSQL LGRTHSYSRD ESAPTWSALN KRDSSPTMIE SDNEGLPMSF YESLGITIET 360 EDEFSESDY

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MPYYENRKKT NRGWIRDDRN IFWGHSCLSR WLSLLQIEVD QIKILWSPEE DEMLESLVKK  60
HGPINLFSEK KHGPINWSLI SKSIPGQSVE TCMSRWFSLQ WSFTPEEDEM LQNLFEKHGP  120
NWSLISKSIP GKSARMCDFR WYAVWNPLWN STLMWKSSSM TNEDITIGAR IPPPSFSNIG  180
RRQVSSYIHA GNINHEVGGV SGQAPSVDDM ARNNVSQPLG STHYYSRGQG SSYIHEGNLS  240
YEVGGVSGQA PSVGDMARYN VSQPWVGTHS YSHGQGSSDI HDRNLSHEVG GVSGQAPSIG  300
DTVRNNVSQL LGRTHSYSRD ESAPTWSALN KRDSSPTMIE SDNEGLPMSF YESLGITIET  360
EDEFSESDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	2e-17	MYB family protein