PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007168.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 287aa    MW: 33007 Da    PI: 8.3319
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007168.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.43.4e-15177275198
                            EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                            f+k l++sd  +  r+v+pk++ae++    ++++++ +++ d ++++Wev ++y  +++ ++yvl     +F  + +L++gD+v+F++
  Cse_sc007168.1_g040.1 177 FEKMLSTSDLKSY-RIVIPKRYAEKFfpAVSEPRGIRMIILDMESKEWEVGFRYwpQRNLKTYVLD-RLIDFMASRKLQAGDIVTFYR 262
                            7777766666655.6*************7777899*******************555555558888.899*****************6 PP

                            -SSSEE..EEEEE- CS
                     B3  85 dgrsefelvvkvfr 98 
                            ++  ++++v+++ +
  Cse_sc007168.1_g040.1 263 EE-PGGRMVIGITK 275
                            44.99999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MAPSSSNSKS SCFQCQDSSS KCFKNGWKLR NGEHAHLCFR CAIYFRSLYK KIFLCATCFY  60
PFSCVYEEGR FCETFHSTDA GWRDCESCGK LVHCGCVVSF NQYFLLDLGG VICLECSKQN  120
FILARNQRYA HEFQTDQPDV PDLAKTVQLE PHYRPPSIDS DIQCIPETSK AVLNPLFEKM  180
LSTSDLKSYR IVIPKRYAEK FFPAVSEPRG IRMIILDMES KEWEVGFRYW PQRNLKTYVL  240
DRLIDFMASR KLQAGDIVTF YREEPGGRMV IGITKTSVAK PPRQATS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30470.11e-27B3 family protein